Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
9359b1BCt7p1
Keyword:
full-length cds
Species:
Unknown
Type:
cDNA
Vector Name:
pSGX3
Format: 
CLOSED
Source:
New York SGX Research Center for Structural Genomics
Description:
None
Comments:
Linker not verified. Actual 5' flanking sequence provided below.
Mutation / Discrepancy:
No / Yes
Publications:
PMID: 19281183
Title: Functional identification of incorrectly annotated prolidases from the amidohydrolase superfamily of enzymes.
Authors:
PSI
New York SGX Research Center for Structural Genomics
UnCD00383571
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 1218nts
Open reading frame: 47 to 1264

TCTGAATATTTTGTTAACTTTAGAAGGAGATATACATATGTCCCTTACCAGCGAGGACTT
TCTGATTAAATCTAAGGGCTATTTAGACATCCAGACGGGTGAGATAATCAAAGCGGACCT
GTTGATTCGTAATGGGAAAATCGCCGAAATTGGCAAGATAAACACCAAAGACGCAACGGT
GATTAGTATCCCGGATCTTATTCTGATACCAGGTCTCATGGATTCACATGTTCACATCGT
CGGAAATGATTCCAAAGGGGAAGAGTCTATTGCTGATAGCTCTCATATGGGAACTGTATG
GGGCGTGGTTAACGCGGAAAAGACATTAATGGCCGGTTTCACTACAGTCCGCAATGTAGG
CGCAGCTAACTACGCGGACGTGAGTGTTCGGGATGCCATCGAGAGAGGTGTCATTAATGG
GCCTACCATGTTGGTGTCAGGACCCGCACTTGGCATAACGGGTGGCCACTGCGACCATAA
CCTGCTCCCGCCAGAATTTAATTATTCCTCGGAGGGTGTAGTTGATAGCCCTTGGGAAGC
TCGAAAAATGGTGCGTAAAAACCGCAAGTACGGGGCGGACCTGATCAAATTCTGTGCCAC
CGGAGGCGTCATGTCTCGTAATACTGATGTTAACGCAAAACAATTTACGCTGGAAGAGAT
GAAGGCTATTGTAGATGAAGCGCACAATCATGGTATGAAAGTGGCCGCACACGCGCATGG
GCTGATAGGCATCAAAGCTGCCATTAAGGCAGGTGTCGACAGTGTTGAGCACGCGTCATT
CATTGATGACGAAACGATCGATATGGCTATTAAAAACAATACCGTGTTGTCCATGGATAT
ATTTGTATCGGACTATATCCTTGGAGAAGGCGCCAAAGCAGGTATTCGCGAGGAAAGCCT
GAACAAGGAGCGGCTCGTCGGGAAAAAACAGCGTGAAAATTTCATGAACGCGCATCGCAG
AGGCGCTATCATTACTTTTGGTACAGATGCCGGAATATTCGACCACGGCGATAATGCAAA
GCAATTTGCGTACATGGTTGAATGGGGTATGACCCCGTTAGAGGCCATCCAGGCATCTAC
GATTAAAACCGCGACTCTGTTTGGGATAGAAAACATCGGACAGATTAAAGAAGGCTTCGA
CGCTGATATCGTGGGTGTAATTGAGAATCCCTTGGCCAACATACGAACACTAGAGGAGGT
TGCGTTTGTGATGAAGGAGGGGAAAGTCTATAAACGTGAAGGGCATCATCACCATCACCA
CTGATCCGAATTCGAGCTCCGTCG

Protein sequence predicted based on nucleotide sequence

TSEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKINTKDATVISIPDLILIPGLMDS
HVHIVGNDSKGEESIADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIER
GVINGPTMLVSGPALGITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLI
KFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAAIKAGVDSV
EHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIREESLNKERLVGKKQRENFM
NAHRRGAIITFGTDAGIFDHGDNAKQFAYMVEWGMTPLEAIQASTIKTATLFGIENIGQI
KEGFDADIVGVIENPLANIRTLEEVAFVMKEGKVYKREGHHHHHH*

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
g216a,E72E;a219g,E73E;
g222t,S74S;a603g,T201T;
t604c,a606g,L202L;a1149g,E383E
                                                    

5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: 50ug/mL kanamycin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Protein_Confirmed
ProteinPurified: Protein_Purified
SolubleProtein: Protein_Soluble
Find experimental protocols in NYSGXRC-9359b
Recommended expression in:
Not Applicable