Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
9355e1BCt10p1
Keyword:
full-length cds
Species:
Unknown
Type:
cDNA
Vector Name:
pSGX3
Format: 
CLOSED
Source:
New York SGX Research Center for Structural Genomics
Description:
None
Comments:
Linker not verified.
Mutation / Discrepancy:
No / Yes
Publications:
PMID: 19358546
Title: Functional annotation of two new carboxypeptidases from the amidohydrolase superfamily of enzymes.
Authors:
PSI
New York SGX Research Center for Structural Genomics
UnCD00430273
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 1248nts
Open reading frame: 1 to 1248

GATGTGGACAGCAAAACCCTGATTCATGCGGGCAAGTTAATCGATGGTAAATCTGACCAG
GTTCAAAGTCGTATATCAATTGTCATCGATGGGAATATTATCTCCGACATAAAAAAGGGC
TTTATCTCGAGCAACGACTTCGAGGACTATATCGACCTCCGAGATCACACGGTATTGCCG
GGACTTATGGATATGCATGTGCACTTTGGTCAGGAGTACCAATCTAAAGCCCAGGCACCA
ATTAAAGTTGAACGGGAGATGCAGGCTATTCTCGCGACTCAACATGCCTATGTCACATTC
AAATCCGGGTTTACCACGGTAAGACAGGTGGGAGATTCAGGCCTGGTTGCAATTTCCTTG
CGGGACGCTATAAATTCGGGGAAACTCGCGGGCCCTCGTATCTTCGCCGCAGGTAAAACT
ATTGCTACAACCGGGGGACACGCTGATCCCACGAACGGCAAGGCCGTCGATGACTACGAT
TATCCGGTGCCAGAACAAGGTGTAGTTAATGGCCCTTACGAAGTGTATGCAGCTGTCCGC
CAGCGTTACAAAGACGGTGCGGATGGGATAAAAATCACCGTTACTGGAGGCGTACTTAGC
GTGGCCAAGAGTGGCCAGAACCCGCAATTTACACAGGAGGAAGTCGATGCAGTTGTGAGT
GCGGCTAAAGACTATGGGATGTGGGTAGCCGTCCATGCACACGGCGCGGAGGGTATGAAA
CGCGCTATTAAGGCCGGAGTTGATTCAATAGAACATGGCACGTTCATGGACCTGGAAGCA
ATGGATCTCATGATCGAGAATGGTACCTATTACGTGCCCACTATTTCCGCGGGGGAATTT
GTAGCTGAGAAATCGAAAATTGACAACTTCTTTCCGGAAATCGTTCGGCCAAAGGCCGCA
AGCGTGGGCCCTCAAATTTCTGATACATTTCGTAAAGCGTATGAAAAAGGTGTCAAGATA
GCCTTCGGAACCGATGCAGGCGTTCAGAAACACGGTACGAATTGGAAAGAGTTTGTGTAC
ATGGTAGAAAACGGGATGCCGGCGATGAAGGCTATCCAGAGTGCCACCATGGAGACTGCG
AAACTGTTACGCATTGAGGACAAACTGGGATCAATCGAATCCGGTAAGTTAGCTGATCTT
ATTGCAGTCAAAGGTAATCCCATAGAGGACATCAGCGTTCTGGAAAACGTGGATGTAGTG
ATTAAAGACGGCCTGCTGTATGAAGGGCATCATCACCATCACCACTGATCCGAATTCGAG
CTCCGTCG

Protein sequence predicted based on nucleotide sequence

DVDSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGFISSNDFEDYIDLRDHTVLP
GLMDMHVHFGQEYQSKAQAPIKVEREMQAILATQHAYVTFKSGFTTVRQVGDSGLVAISL
RDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVR
QRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAEGMK
RAIKAGVDSIEHGTFMDLEAMDLMIENGTYYVPTISAGEFVAEKSKIDNFFPEIVRPKAA
SVGPQISDTFRKAYEKGVKIAFGTDAGVQKHGTNWKEFVYMVENGMPAMKAIQSATMETA
KLLRIEDKLGSIESGKLADLIAVKGNPIEDISVLENVDVVIKDGLLYEGHHHHHH*

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
g7c,a8c,c9t,D3P;g11t,c12a,S4I;
a14g,K5R;a144g,E48E;
g159c,L53L;c162a,R54R;
g303a,K101K;a304t,g305c,t306c,S102S;
a360g,L120L;a363g,R121R;
t366c,D122D;t381g,G127G;
t385c,g387c,L129L;t610a,c611g,S204S;
t615c,G205G;a1098g,E366E;
c1125t,G375G;g1131a,L377L
                                                    

5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: 50ug/mL kanamycin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Protein_Confirmed
ProteinPurified: Protein_Purified
SolubleProtein: Protein_Soluble
Find experimental protocols in NYSGXRC-9355e
Recommended expression in:
Not Applicable